CDS

Accession Number TCMCG016C12906
gbkey CDS
Protein Id OMO79306.1
Location join(77586..77768,78315..78524,79401..79463,79554..79627,79857..79952,81130..81187,81262..81366,81455..81536,82349..82461,82677..83099)
Organism Corchorus capsularis
locus_tag CCACVL1_13760

Protein

Length 468aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010427.1
Definition hypothetical protein CCACVL1_13760 [Corchorus capsularis]
Locus_tag CCACVL1_13760

EGGNOG-MAPPER Annotation

COG_category A
Description polypyrimidine tract-binding protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K14948        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000381        [VIEW IN EMBL-EBI]
GO:0000932        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009845        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0035770        [VIEW IN EMBL-EBI]
GO:0036464        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048024        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090351        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCAACGTCGAGCCAACCTCAGTTCCGTTACACCCAGACTCCATCGAAGGTCCTCCATCTACGTAACCTGCCATGGGAGTGTGCGGAAGAGGAACTTGTTGAGCTTTGTAAACCCTTTGGGAAGATCGTTAATACTAAGTGCAATGTCGGCGCCAATCGGAACCAAGCTTTTGTGGAATTCGCAGACTTAAATCAGGCTATTTCAATGGTTTCGTACTATGCTTCATCATCGGAGCCAGCACAGGTTCGTGGAAAAACTGTATATATTCAATATTCAAACAGACATGAAATTGTGAACAACAAGAGTCCTGGAGATACCCCAGGAAATGTGTTGCTGGTTACCATTGAGGGTGTAGAAGCTAATGATGTGACCATTGAGACAATTCACTTGGTATTTTCTGCATTTGGCTTTGTGCACAAAATTGCTACTTTTGAAAAGGCTGCTGGATTCCAGGCATTAATCCAGTTCACTGATGCTGAAACTGCATCTTCAGCCAGGAATGCCTTAGATGGGAGAAGTATTCCCAGGTACTTGCTTCCAGATCACGTTACTTCTTGTCACCTGCGAATTTCATATTCTGCACATACCGATCTGAACATCAAGTTTCAGTCTCATCGGAGCAGGGACTATACCAATCCATACCTTCCTGTAAATCCTACTGCGATGGAGGGACTTATGCAGCCTGTAGTTGGTCCAGATGGTAAAAAGCAAGAACCTCAGAGTAATGTGTTACTTGCTTCAATTGAAAATATGCAGTATGCTGTTACAGTTGATGTTCTTCACACGGTATTCTCAGCATTTGGCACTGTACAAAAGATTGCAATATTTGAGAAGAATGGTGGAACACAGGCACTAATCCAGTATCCTGATGTCACAACCGCAGCTGTTGCCAAAGAAGCTTTAGAGGGACACTGCATATATGATGGTGGCTATTGTAAGCTTCATCTATCATACTCTCGTCATACTGATCTCAATGTAAAGGCTTACAGTGATAAAAGTAGAGATTACACTATCTCAGACCCAAGCTTGCTTGCAACACAAGTTCCTGGTATGCCTGCTGCTCCAAGTGTTTGGCAAAATCCTCAGGGTGCCGGTGCTCCATTGTACCCTGCGACTGACTATGCAGCTTCAGCTGCGTTGCAGGCTCAACCCCCTGCTGGACAAGTTCCAGCTTGGGATCCAAATTTGCAGGTTAGACCACCTTATGGATCAGTCCCTGGTAGTGTTCCTAGTCAATCATATCAAGCATCCTCAGTCCCTACATATGTGAATGCTGCAACACCTGCTGGTTCGTCACCACTTTCTCAACCTGGTGTGTCTACCATGAGAATGCCACATCCAGGGGCTAGTGTTAGACCAGGTGGTGCACCGGTTCCGGGTCAGCCCCCTTATTATGGTCAATGA
Protein:  
MSTSSQPQFRYTQTPSKVLHLRNLPWECAEEELVELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDTPGNVLLVTIEGVEANDVTIETIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLPDHVTSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGLMQPVVGPDGKKQEPQSNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTAAVAKEALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTISDPSLLATQVPGMPAAPSVWQNPQGAGAPLYPATDYAASAALQAQPPAGQVPAWDPNLQVRPPYGSVPGSVPSQSYQASSVPTYVNAATPAGSSPLSQPGVSTMRMPHPGASVRPGGAPVPGQPPYYGQ